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powerplex fusion str system  (Promega)

 
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    Promega powerplex fusion str system
    Powerplex Fusion Str System, supplied by Promega, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/powerplex+fusion+str/powerplex+16+system/pmc12130525-195-9-13
    Average 90 stars, based on 1 article reviews
    powerplex fusion str system - by Bioz Stars, 2026-09
    90/100 stars

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    Article Title: Epigenomic mapping reveals distinct B cell acute lymphoblastic leukemia chromatin architectures and regulators
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines 697 B-ALL cells DSMZ ACC 42; RRID:CVCL_0079 BALL1 B-ALL cells DSMZ ACC 742; RRID:CVCL_1075 Nalm6 B-ALL cells ATCC CRL-3273; RRID:CVCL_0092 REH B-ALL cells ATCC CRL-8286; RRID:CVCL_1650 RS4; 11 B-ALL cells ATCC CRL-1873; RRID:CVCL_0093 SEM B-ALL cells DSMZ ACC 546; RRID:CVCL_0095 SUP-B15 B-ALL cells ATCC CRL-1929; RRID:CVCL_0103 JIH-5 B-ALL cells DSMZ ACC 788; RRID:CVCL_EQ76 Oligonucleotides CRISPR-Cas9 deletion DNA oligo sequences This paper See Table S10 dCas9-KRAB CRISPRi DNA oligo sequences This paper See Table S11 rs17481869 luciferase assay DNA oligo sequences This paper See Table S12 Recombinant DNA TRE3-KRABdCas9-IRES-GFP Fulco et al.54 Addgene #85556 sgOpti Fulco et al.54 Addgene #85681 pLVX-EF1alpha-Tet3G Clontech 631359 pGL4.23 Promega E841A pRL-TK renilla Promega E2231 Software and algorithms Arima CHiC pipeline (v1.4) Arima Genomics https://github.com/ArimaGenomics/CHiC FlashFry McKenna et al.55 https://github.com/mckennalab/FlashFry ChIPseeker (v1.30.3) Yu et al.56 https://bioconductor.org/packages/ release/bioc/html/ChIPseeker.html DESeq2 (v1.34.0) Love et al.57 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Pheatmap (v1.0.12) Kolde58 https://github.com/raivokolde/pheatmap Clusterprofiler (v4.2.2) Yu et al.59 https://bioconductor.org/packages/ release/bioc/html/clusterProfiler.html ATACseqQC (v1.18.1) Ou et al.60 https://bioconductor.org/packages/ release/bioc/html/ATACseqQC.html ggplot2 (v3.3.6) Wickham61 https://github.com/tidyverse/ggplot2 Michigan Imputation Server (v1.6.5) Das et al.62 https://imputationserver.sph.umich.edu/ RASQUAL (v1.1) Kumasaka et al.30 https://github.com/natsuhiko/rasqual TrimGalore (v0.6.6) Krueger63 https://github.com/FelixKrueger/ TrimGalore Bowtie2 (v2.2.9) Langmead and Salzberg64 http://bowtie-bio.sourceforge. net/bowtie2/index.shtml Samtools (v1.2) Li et al.65 http://samtools.sourceforge.net/ Picard (v1.141) Broad Institute66 https://github.com/broadinstitute/picard MACS2 (v2.1.1) Zhang et al.67 https://github.com/macs3- project/MACS/wiki/Install-macs2 Bedtools (v2.30.0) Quinlan and Hall68 https://github.com/arq5x/bedtools2 nondetects Sherina et al.69 https://www.bioconductor.org/packages/ release/bioc/html/nondetects.html Primer-Blast Ye et al.70 http://www.ncbi.nlm.nih.gov/ tools/primer-blast CHiCAGO (v1.22.0) Freire-Pritchett et al.71 https://www.bioconductor.org/ packages/devel/bioc/vignettes/ Chicago/inst/doc/Chicago.html (Continued on next page) Cell Genomics 3, 100442, December 13, 2023 e2 Resource ll OPEN ACCESS

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    Article Title: Epigenomic mapping reveals distinct B cell acute lymphoblastic leukemia chromatin architectures and regulators
    Article Snippet: Cell lines were authenticated with PowerPlex Fusion STR (Promega) profiling and screened for mycoplasma using the MycoScope PCR detection kit (Genlantis). e3 Cell Genomics 3, 100442, December 13, 2023 Resource ll OPEN ACCESS .. Cell lines were authenticated with PowerPlex Fusion STR (Promega) profiling and screened for mycoplasma using the MycoScope PCR detection kit (Genlantis). e3 Cell Genomics 3, 100442, December 13, 2023 Resource ll OPEN ACCESS .. Briefly, 10,000 cells were pelleted in a 1.5 mL Eppendorf low-bind sample tube (#022431021) and resuspended in 25 mL of transposase mix (25 mL TD buffer, 2.5 mL TDE1, 0.5 mL 1% digitonin, and 22 mL nuclease free water; see key resources table).

    Article Title: Epigenomic mapping reveals distinct B cell acute lymphoblastic leukemia chromatin architectures and regulators
    Article Snippet: .. Cell lines were authenticated with PowerPlex Fusion STR (Promega) profiling and screened for mycoplasma using the MycoScope PCR detection kit (Genlantis). ..



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    Journal: Cell Genomics

    Article Title: Epigenomic mapping reveals distinct B cell acute lymphoblastic leukemia chromatin architectures and regulators

    doi: 10.1016/j.xgen.2023.100442

    Figure Lengend Snippet:

    Article Snippet: PowerPlex Fusion STR , Promega , DC2402.

    Techniques: Negative Control, Clinical Proteomics, Luciferase, Reporter Assay, Modification, Biomarker Discovery, Variant Assay, CRISPR, Recombinant, Software